GENERAL SUMMARY/OVERVIEW STATEMENT:
The Channing Division of Network Medicine (CDNM) focuses on network medicine and systems biology approaches to complex diseases. The Functional Genomics Laboratory, within the CDNM, utilizes in vitro and in vivo models to evaluate the function of genetic variants in complex diseases and to validate hypothesized network interactions. The Research Specialist functions very independently and under the general supervision of the Functional Genetics Laboratory Director. The Research Specialist will be an active participant in the experimental research, mainly in the functional characterization of asthma- and COPD- associated genetic loci and their related gene networks. The Research Specialist will be responsible for developing high-throughput functional genomics experiments within the Functional Genomics laboratory to support a group of Investigators carrying out research in asthma, chronic obstructive pulmonary disease (COPD), and other disorders of the respiratory system. The Research Specialist performs non-routine, highly specialized molecular genomics experiments (including but not limited to CRISPR-based genome editing methods, 3C (chromatin conformation capture assay), 4C (circular chromatin conformation capture assay), massive parallel reporter assay (MPRA), molecular cloning, and luciferase reporter assays. The research scientist will have the opportunity to present lab work, participate in the modification of research protocols, and contribute to the scientific literature. Specific responsibilities will include design and execution of high-throughput genetic and genomic experiments, as well as assessment and implementation of new methods and platforms. Hiring and supervising laboratory technicians may be required, and assisting the Functional Genetics Laboratory Director in the training of technicians in these methods.
PRINCIPAL DUTIES AND RESPONSIBILITIES:
- Establish and optimize protocols for chromatin structure assessment of GWAS loci.
- Design optimal experiments for validation of networks, establish appropriate cellular model outcomes relevant to the network of interest derived from different types of Big Data. This includes but is not limited to using siRNA or shRNA for gene silencing in relevant cell types to validate genomics and pharmacogenomics network findings by experimental perturbation targeting key genes.
- Update existing protocols, archive obsolete protocols, and write new protocols when necessary.
- Responsible for coordination of assigned projects, including quality assurance, preparing data reports, prioritizing time in order to meet deadlines, and maintain detailed and accurate laboratory notebooks and other records.
- Establishes new research techniques. Continually evaluates new technology and approaches to existing methods. Maintains active knowledge of current literature in functional genomics.
- Present experimental results at weekly seminars. Develops rapport and excellent communication with team members.
- May be required to supervise laboratory technicians, including hiring, performance evaluation, disciplinary action, orientation and training. Train new lab technicians with basic molecular and cellular biology techniques.
- In collaboration with the bioinformatics team, determines appropriate sample tracking for high-throughput experiments. Tests, troubleshoots, and actively participates in usage and design of in-house LIMS and other software.
- Develops and implements rigorous quality control procedures for all experiments. Data integrity checks, quality control verification, and sample and data tracking are required. Learns new data analysis methods for analyzing large data sets.
- All other duties as assigned.
QUALIFICATIONS:
- Ph.D. preferred. MS degree or equivalent education in scientific field of research
- 5 to 7 years of direct research experience.
- Experience in molecular genomics techniques such as 3C, 4C, MPRA, CRISPR, siRNA/shRNA gene silencing, and molecular cloning are highly desirable.
- Ability to analyze and interpret large data sets is preferred. Familiarity with R programming, statistical analysis, and other software and bioinformatics tools is highly desirable.
SKILLS/ABILITIES/COMPETENCIES REQUIRED:
•Strong research design and analytical skills.
•Strong database statistical skills.
•In-depth knowledge of field of research.
•Excellent time management/organizational skills
•Ability to independently troubleshoot.
•Strong written and verbal presentation skills.
•Excellent interpersonal skills and teamwork.
WORKING CONDITIONS:
Variety of laboratory/office settings. Exposure to toxic chemicals, biohazardous materials and radioisotopes. Work may require odd hours to complete experiments.
SUPERVISORY RESPONSIBILITY:
May require supervision of more than one direct report. Will train new staff in laboratory procedures.
Brigham and Women’s Hospital is an Equal Opportunity Employer. All qualified applicants will receive consideration for employment without regard to race, sex, color, religion, national origin, sexual orientation, protected veteran status, or on the basis of disability.